Thanks for the response, Bob.
This isn't a cry for help, it's an oddity I observed that I couldn't explain but could duplicate within the project. Because of time constraints and being "on the clock" at a customer site, I didn't try an build or a new project.
I routinely break longer sequences into several shorter segments so that rework is minimized if there are any issues with the footage. The segments normally fade to black at the cut lines for ease of assembly. All this is done in the FCP timeline. Then the segments are output and batch encoded.
In the case I observed, the "following" clip would not respond in playback until the playback stopped. The playback system was a dual 2GHz G5 with adequate RAM and disk resources. The timeline in DVDSP was simple (one angle for video, one for audio, no subtitles or the like) but would not play back accurately in either simulation or track playback. It was fine in frame stepping. The audio always played back fine, the video was 29.97 fps dv encoded as MPEG-2 in Compressor. No tricks.
I worked around the issue by placing the clips on separate tracks and linking them. When I was certain there were no more changes coming, I went back and consolidated all the clips in a single FCP timeline, re-encoded, and took a single clip into DVDSP for the Build. No problems.
Again, my curiosity as to the "bad actor" on this the motive for the post. Anyone?